One question I’d be asking is if an alternator charges at the correct voltage for the deep cycle (or an AGM type if you went that route).
I think the alternator puts out a voltage slightly lower than the deep cycle wants to ‘fully charge’ and does not have the smarts to properly cut off when it’s charged properly. You can get a DC-DC charger but they tend to be a bit pricy.
Never make that assumption about alternators/generators on vehicles or tractors. They generally output 13.8V-21V, very few put out a rectified 12V or less than 12V (if they did they would never recharge the battery, they would only keep up with the vehicles power demand, or in the case of less your lights start flickering).
Older tractors are slightly different in that they usually have almost no power draw unless the lights are on. Had one tractor that needed to be disconnected after starting because it would happily boil the battery dry.
Alternators are not intelligent charging devices, they do not have the capability to properly charge or maintain batteries, and that is not what they are there for. Propper battery charging is not voltage based, it is current and temperature based.
Myself I use an inverter-charge controller inline on my RV deepcell batteries, it controls when to limit current due to battery temperature or capacity, when to shutoff supply to protect each of the batteries, and when it needs to balance.
When the batteries are out, they live on a charger that has the capability to exercise them. One could use a trickle charger, but I feel that shortens the life of deepcell/high discharge batteries.
The average, generic, non-regulated, alternator output is supposed to be around 14.5-14.8V I have always been told.